CDS

Accession Number TCMCG013C12070
gbkey CDS
Protein Id XP_015384287.1
Location complement(join(28322203..28322286,28322438..28322506,28322594..28322660,28322860..28322927,28323476..28323586,28323679..28323736,28323824..28323860,28324414..28324507,28324836..28324901,28325003..28325067,28325218..28325362,28325476..28325541,28326032..28326181,28326798..28326867,28327055..28327131,28327233..28327301,28327415..28327498,28328313..28328356,28328497..28328640,28328762..28328960,28329669..28329797,28329895..28329978,28330358..28330471,28330720..28330827,28330907..28331002,28331773..28331841,28331950..28332051,28332197..28332292,28332796..28332879,28333845..28333962,28334043..28334116,28334473..28334667,28334825..28335069,28335648..28335798,28336262..28336378,28336456..28336545))
Gene LOC102618032
GeneID 102618032
Organism Citrus sinensis

Protein

Length 1212aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA225998
db_source XM_015528801.2
Definition NPC intracellular cholesterol transporter 1 isoform X3 [Citrus sinensis]

EGGNOG-MAPPER Annotation

COG_category I
Description Niemann-Pick C1
KEGG_TC 2.A.6.6
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko02000        [VIEW IN KEGG]
KEGG_ko ko:K12385        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04142        [VIEW IN KEGG]
ko04979        [VIEW IN KEGG]
map04142        [VIEW IN KEGG]
map04979        [VIEW IN KEGG]
GOs GO:0000323        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005496        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005576        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005764        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0005887        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006486        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006869        [VIEW IN EMBL-EBI]
GO:0007034        [VIEW IN EMBL-EBI]
GO:0007041        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008202        [VIEW IN EMBL-EBI]
GO:0008206        [VIEW IN EMBL-EBI]
GO:0008289        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009100        [VIEW IN EMBL-EBI]
GO:0009101        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010876        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015485        [VIEW IN EMBL-EBI]
GO:0015850        [VIEW IN EMBL-EBI]
GO:0015918        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016021        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0030301        [VIEW IN EMBL-EBI]
GO:0031224        [VIEW IN EMBL-EBI]
GO:0031226        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032787        [VIEW IN EMBL-EBI]
GO:0032934        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042592        [VIEW IN EMBL-EBI]
GO:0042632        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043178        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043413        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044459        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048471        [VIEW IN EMBL-EBI]
GO:0048878        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0055088        [VIEW IN EMBL-EBI]
GO:0055092        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070085        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901137        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901615        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAACAATCACCTTTTTATTTCAAAGGAAATGGTTATGAATACCCACAGTCATGTGCCCATGCTCTTAGGAAGGGTGCTTTGGTTACAGCGATTCCCTTTCTTGTAGGTTGTCCAGCATGTTTGAGAAACTTTTTAAATCTGTTCTGTGAGCTTACCTGCTCTCCAAATCAGAGTTTATTTATCAATGTGACTTCTGTTTCCAAGGTCAGTAATAATTTGACAGTGGATGGGATTGACTATTATATAACTGACACTTTTGGTCAAGGGTTATATGAATCTTGCAAGGATGTAAAATTTGGTACCATGAATACTCGAGCATTAGATTTTATTGGTGGGGGTGCTCAAAATTTTAAAGATTGGTTTGCTTTTATTGGTAGGCGAGCTGCTGCCAATCTGCCTGGTTCACCATATACTATTAAGTTTTGGCCAAGTGCTCCTGAGTTATCTGGAATGATACCTATGAATGTATCTGCTTATTCATGTGCTGATGGTTCACTTGGCTGTTCTTGTGGTGATTGCACTTCCTCTCCTGTCTGCTCTAGTACAGCACCTCCTCCACACAAAAGCAGCTCCTGTTCAGTTAAAATGGGATCTCTTAATGCCAAATGTGTTGACTTTGCTTTAGCAATCCTGTATATAATACTGGTTTCTCTGTTTTTTGGGTGGGGTTTCTTTCATCGTAAAAGAGAAAGGAGCCGATCCTTTAGAATGAAGCCACTGGTAAATGCAATGGATGGTAGTGAACTGCATTCTGTTGAAAGGCAGAAAGAAGAGAACCTCCCCATGCAGGTGCAGATGCTTGGTACTCCTAGAACTAGAAACAGAATTCAGCTTTCGATTGTGCAAGGATACATGTCAAATTTTTACAGGAAATATGGAAAATGGGTTGCTAGAAATCCAACCCTTGTATTGAGTTTGTCAATGGCTTTGGTTCTTCTACTTTGTTTAGGTCTAATCCGTTTCGAGGTCGAAACACGGCCTGAGAAGCTTTGGGTTGGGCCTGGGAGTAGAGCCGCAGAGGAGAAACTATTTTTCGACAGCCACCTTGCTCCTTTCTACAGAATTGAAGAGCTAATATTGGCGACCATTCCAGACACCACTCATGGGAACTTACCGAGTATTGTGACAGAGAGCAACATTAAGTTACTTTTTGAAATACAGAAGAAGATTGATGGACTTCGTGCAAATTATTCTGGCTCAATGATATCTCTCACAGACATTTGCATGAAGCCACTGGGCCAGGATTGTGCCACACAAAGCGTTCTGCAGTATTTCAAAATGGATCCTAAAAATTTTGATGATTTCGGAGGAGTTGAACATGTCAAGTATTGTTTTCAGCATTATACATCTACAGAATCATGCATGAGTGCTTTCAAAGGTCCCCTTGATCCAAGCACCGCATTAGGAGGTTTCTCTGGGAACAACTATTCTGAGGCATCTGCTTTTGTTGTTACATATCCAGTAAACAATGCAGTAGATAGAGAAGGAAATGAAACCAAAAAAGCAGTAGCTTGGGAAAAGGCCTTTGTTCAGTTAGCAAAGGATGAGTTGTTGCCCATGGTTCAGTCAAAAAATTTAACACTTGCTTTTTCATCGGAGAGCTCCATTGAGGAAGAACTGAAAAGAGAAAGTACTGCAGATGCCATAACTATAGTGATAAGCTACTTGGTAATGTTTGCGTACATATCTCTTACATTGGGTGATACACCTCACTTATCTTCCTTCTACATTTCTTCTAAGGTATTGCTTGGCCTTTCTGGGGTTGTTCTTGTCATGCTCTCTGTTCTTGGATCAGTTGGTTTTTTTAGTGCAATTGGAGTAAAATCAACCCTCATCATCATGGAAGTTATTCCTTTTCTTGTTTTAGCTGTTGGGGTGGATAATATGTGTATACTAGTGCATGCTGTTAAGCGGCAGCAGCTGGAGTTACCTTTGGAAACACGAATAAGCAATGCACTTGTGGAAGTTGGACCATCCATAACACTTGCTAGTTTATCTGAGGTTTTAGCATTTGCAGTTGGAAGTTTTATTCCTATGCCAGCCTGCCGTGTCTTCTCCATGTTTGCCGCGCTAGCTGTTTTGTTGGACTTCCTTCTGCAAATTACTGCTTTTGTTGCTTTAATAGTTTTTGACTTTTTGCGAGCTGAAGATAAGAGGGTTGACTGTATTCCATGCTTAAAACTATCTTCTTCATATGCTGACTCTGACAAAGGCATTGGTCAGAGAAAACCTGGACTCTTGGCTCGATATATGAAGGAGGTCCATGCAACGATTCTCAGTCTCTGGGGAGTGAAAATAGCTGTTATTTCTCTATTTGTTGCATTCACTTTGGCTAGCATTGCATTATGCACCCGGATTGAACCTGGTTTGGAGCAGAAGATTGTTCTTCCACGAGACTCATATCTTCAGGGGTATTTTAATAATATTTCAGAGCATCTCAGAATTGGACCACCACTTTATTTTGTTGTAAAGAACTATAATTACAGCTCAGAATCAAGGCAGACGAATCAGCTGTGTTCAATCAGCCAATGTGATTCAAACTCTCTTTTGAATGAGATTTCAAGAGCATCGTTGATTCCACAATCAAGCTACATTGCTAAGCCAGCTGCTTCATGGCTTGATGATTTTCTTGTATGGATATCTCCTGAAGCTTTTGGTTGCTGTCGAAAGTTCACAAATGGGAGTTATTGCCCACCTGACGACCAGCCTCCTTGCTGCCCTTCTGGTCAAAGTTCCTGTGGCTCGGCTGGAGTATGCAAAGATTGTACAACGTGCTTCCACCACTCGGATTTGCTTAAAGATCGACCATCTACCATACAGTTCAAGGAAAAACTTCCATGGTTCCTGAATGCTCTGCCTTCGGCCAGTTGTGCGAAGGGTGGCCATGGTGCATACACCAACAGTGTGGATTTGAAAGGTTATGAAAATGGAATTGTACAAGCTTCTTCCTTTCGTACATATCATACACCCCTCAACAGGCAGATTGATTATGTTAATTCCATGAGAGCTGCTCGAGAATTCAGTTCAAGAGTTTCTGATTCTTTGCAGATGGAGATCTTTCCGTATTCTGTATTTTATATGTATTTTGAGCAATACCTTGATATTTGGAGGACTGCACTGATCAACCTTGCTATAGCTATTGGCGCCGTATTTGTTGTTTGTTTAATTACCACATGCAGTTTTTGGAGTTCAGCAATCATTTTGCTGGTGTTGACAATGATTGTGGTGGATCTTATGGGTGTGATGGCAATTCTGAAGATCCAACTAAATGCAGTCTCTGTTGTTAATCTTGTCATGGCAGTTGGCATTGCTGTCGAGTTCTGCGTGCATATAACACATGCTTTCTCCGTAAGCAGTGGAGACAAAAACCAGCGCATGAAAGAGGCTCTTGGTACGATGGGGGCTTCTGTCTTCAGTGGAATCACGCTCACAAAGCTAGTTGGAGTTATCGTTCTTTGCTTCTCAAGGACAGAAGTTTTTGTGGTTTATTACTTCCAAATGTACCTAGCTCTGGTCCTTCTCGGTTTCTTGCACGGCCTTGTATTTCTACCGGTTGTATTAAGCGTGTTTGGTCCACCTTCAAGATGTATGCTTGTTGAGAGGCAAGAAGAGAGACCATCAGTTTCTTCGCTGTGA
Protein:  
MEQSPFYFKGNGYEYPQSCAHALRKGALVTAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSVSKVSNNLTVDGIDYYITDTFGQGLYESCKDVKFGTMNTRALDFIGGGAQNFKDWFAFIGRRAAANLPGSPYTIKFWPSAPELSGMIPMNVSAYSCADGSLGCSCGDCTSSPVCSSTAPPPHKSSSCSVKMGSLNAKCVDFALAILYIILVSLFFGWGFFHRKRERSRSFRMKPLVNAMDGSELHSVERQKEENLPMQVQMLGTPRTRNRIQLSIVQGYMSNFYRKYGKWVARNPTLVLSLSMALVLLLCLGLIRFEVETRPEKLWVGPGSRAAEEKLFFDSHLAPFYRIEELILATIPDTTHGNLPSIVTESNIKLLFEIQKKIDGLRANYSGSMISLTDICMKPLGQDCATQSVLQYFKMDPKNFDDFGGVEHVKYCFQHYTSTESCMSAFKGPLDPSTALGGFSGNNYSEASAFVVTYPVNNAVDREGNETKKAVAWEKAFVQLAKDELLPMVQSKNLTLAFSSESSIEEELKRESTADAITIVISYLVMFAYISLTLGDTPHLSSFYISSKVLLGLSGVVLVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLETRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMFAALAVLLDFLLQITAFVALIVFDFLRAEDKRVDCIPCLKLSSSYADSDKGIGQRKPGLLARYMKEVHATILSLWGVKIAVISLFVAFTLASIALCTRIEPGLEQKIVLPRDSYLQGYFNNISEHLRIGPPLYFVVKNYNYSSESRQTNQLCSISQCDSNSLLNEISRASLIPQSSYIAKPAASWLDDFLVWISPEAFGCCRKFTNGSYCPPDDQPPCCPSGQSSCGSAGVCKDCTTCFHHSDLLKDRPSTIQFKEKLPWFLNALPSASCAKGGHGAYTNSVDLKGYENGIVQASSFRTYHTPLNRQIDYVNSMRAAREFSSRVSDSLQMEIFPYSVFYMYFEQYLDIWRTALINLAIAIGAVFVVCLITTCSFWSSAIILLVLTMIVVDLMGVMAILKIQLNAVSVVNLVMAVGIAVEFCVHITHAFSVSSGDKNQRMKEALGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQMYLALVLLGFLHGLVFLPVVLSVFGPPSRCMLVERQEERPSVSSL